PDB to RNA Base Pairs
| Introduction |

RF2 A subunit output

PDB file
Base pair file
Base pair coordinate file

For local use in pymol:

Download Cones_native.py
and the Base pair coordinate file

use pymol commands or a script similar to this:
(Correct paths as needed)

load 70S_RF2A.pdb , 70S_RF2A
set cartoon_ladder_mode,0,all
run cones_native.py
load_basepairs("cone.dat" , r=1, name='cone_basepairs', COLR=[0.70, 0.70, 0.70])
cmd.show_as("cartoon" ,"70S_RF2A")